Data Analysis Tools ORF Finder HMMER InterProScan ClustalW MEGA

Legume Trancription Factor Knowledge Base
----- Legume - TFKB (1.0)

  • With the availability of public legume ESTs, genome-scale gene spaces of cowpea and common bean, fully sequenced soybean and Medicago genomes, we predicted and analyzed putative transcription factors (TFs) for six legume species ---- cowpea (Vigna unguiculata), common bean (Phaseolus vulgaris), lotus (Lotus Japinica), alfalfa ( Medicago sativa), soybean (Glycine max), and Medicago ( Medicago truncatula).
  • We are making extensive annotations at both transciption factor family and gene levels, also conducting similarity searches against major databases and integration with key public references for each family possible to UniProt, RefSeq , and TransFac, Gene Ontology, UniGene Expression etc..
  • Legume-TFKB (1.0) is a knowledgebase developed at the University of Virginia for the efforts to identify and catalogue legume genes involved in transcriptional control for protein and oil biological processes as model system for animal need as feed, human need as food source, and national need of biofuel / biodiesel production.


Browse All TF Families Cowpea Common Bean Lotus Alfalfa Medicago Soybean Soybean TF Summary


Browse Particular Trancription Factor Family
(No data loaded yet)
Soybean
Cowpea
Medicago
Lotus
Common Bean

















Last updated by Dr. Xianfeng Jeff Chen on July 13, 2009.