Summary of Sequences of Putative Trancriptional Factor Families in Various Databases

TF Family Medicago TFDB TOBFACT Soybean PlantTFDB PlnTFDB
Rice/Populus/Arabidopsis
Soy - TFKB AtTFDB SoyDB
ABI-VP3 2 76 129 60/83/59 80 10 99
Alfin 2 9 24 12/9/9 64 7 45
AP2-EREBP 2 35 176 188/211/166 321 136 426
ARF 58 12 13 49/37/35 73 24 101
ARID 5 8 2   2 (?) 7 62
ARR-B       12/15/17 116 15  
AS2 22 75 25   84   96
AUX-IAA 4 35 106   101   107
BBR-BPC   3 9 9/16/16 21 7 19
BES   19 17 6/12/14 20   21
bHLH 66 190 132 196/159/172 245 161 559
bZIP 24 75 83 127/84/110 108 73 235
CAMTA 6 6 1 7/7/7 13   92
C2C2-CO-like     31 24/14/21 80+ 29 118
C2C2-GATA 24 28 12 37/36/37 66 30 113
C2C2-YABBY   10 21 14/13/8 28 6 46
CONSTANS   40     64    
C2H2 48 161 63 124/113/107 4 (?) 211 392
C3H 36 69 54 109/99/83 14 (?) 164 197
CCAAT 14(?) 36+ 60+ (???) 100 +(?) 35+ 110+
CSD       3/7/4 43    
CPP 3 3 5 19/12/9 16 8 14
DDT         4    
C2C2-Dof   46 34 36/41/44 87 36 102
E2F-DP 3 6 12/10/14 14 8 40
EIL 6 6 12 10/6/6 14 6 28
ERF   239     204    
FHA 1 12 14 22/18/19 2   72
G2-like   64 43 57/66/53 143 40 131
GeBP 1 15 5 6/7/20 16 16 25
GRAS 20 45 35 63/98/36 99 32 164
GRF 2 23 6 18/9/9 38 9 4
GIF   4 7   20   19
Homeodomain 37 129 73 137/130/105 147 102 330
HMG 1 9 45 n/a 33   94
HRT 2 2   1/1/2 1 3 17
HSF 5 34 29 40/31/24 64 21 31
JUMONJI 10 18 9 17/20/20 25 5 109
LFY 1 2 1 1/1/1 2   21
LIM 2   25 7/13/10 26   57
LUG 3 4 3   10   14
MBF 2 5 18   3   10
MADS 38 119 40 87/111/124 217 111 295
MYB 91 56 160+ 134/213/165 343 200+ 450+
NAC 45 152 111 146/167/120 200+(?) 94 226
Nin-like 4 11 3   14   43
NOZZLE (NZZ) 2 2 0/0/1 5   3
Orphans       216/147/86 23+(?) 2  
PBF-2-like(with Whirly) 2     3/3/4 10    
PcG 5 20 24   9   36
PHD 8 59 33 61/70/55 65 11 198
PLATZ 2 15 28 20/20/13 40   58
RB         25    
RWP-RK       14/18/16 16    
SAP 1 4   0/1/1 1   12
SBP 10 27 (8) 29/29/28 58 16 79
SET       34/44/46 40    
Sigma70-like       9/9/6 (?)    
SRS 2 12 5 6/10/13 24   41
SNF2       48/48/43 64    
S1FA   1 11   1   5
TCP 5 43 9 25/33/30 37 26 76
Trihelix 12 40 32 26/43/27 25 29 75
TUB 6     26/11/15 37 10  
TULP   13 34   37   53
ULT   4 2 2/2/2 10+   7
TAZ 7 8 3 7/9/11 18   104
VOZ   2 3 2/4/3 8   16
WHIRLY(PBF-2-like) 2 2 8 3/3/4 12 3 22
WRKY 81 93 106 119/101/85 198 72 246
ZF-HD 7 38 16 15/23/18 55 15 63
ZIM 6 13 41 23/16/23 39   81


Last updated by Dr. Xianfeng Jeff Chen on June 10, 2009.