- The Soy-TFKB is collecting over 2000+ predicted putative
transcription factors in soybean genome within 76 classified TF families,
which is the largest TF family classfication in plant species.
- We used the assembled transcripts from latest (2009) EST-based unigenes and
JGI completed chromosome-based genomic sequences
to predict TFs. We also compared and summarized TF sequence numbers
in each family in soybean comparing with rice, Arabidopsis, and Polular for over/under-representation
of TF sequences in each family.
- Soy-TFKB is the latest TFKB with complete soybean genome based TF family
classification than PlantTFDB
EST-based or SoyDB scaffold based TF family classifications.
- The following table allows to browse TF families. The numbers in parenthesis show the estimated number of
loci and number of gene models found, respectively.
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