BLASTP 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= aa
         (70 letters)

Database: Glyma1.pep.fa 
           75,778 sequences; 25,431,846 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g05960.1                                                        89   8e-19
Glyma17g20020.1                                                        84   3e-17

>Glyma11g05960.1 
          Length = 654

 Score = 89.4 bits (220), Expect = 8e-19
 Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 8/77 (10%)

Query: 2   CVVGSV*----PGMSIVIPAPQVSKTHARITCKDGAFYLIDLRSEHGSFITDIEG----* 53
           C++GS+     PG SI+IP PQVS+ HARI  KDGAF+L DLRS HG++ITD EG     
Sbjct: 549 CIIGSMQQKDHPGSSIIIPLPQVSQMHARINYKDGAFFLTDLRSLHGTWITDNEGRRYRV 608

Query: 54  PPNFPTRFHPSDMIEFG 70
           PPN+P R  PSD++EFG
Sbjct: 609 PPNYPARVRPSDVVEFG 625


>Glyma17g20020.1 
          Length = 669

 Score = 84.0 bits (206), Expect = 3e-17
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 4/65 (6%)

Query: 10  GMSIVIPAPQVSKTHARITCKDGAFYLIDLRSEHGSFITDIEG----*PPNFPTRFHPSD 65
           G S+ I +PQVS THARI  KDGAF+LIDLRSEHG++I D EG     PPN+P R  PSD
Sbjct: 576 GSSVTISSPQVSPTHARINYKDGAFFLIDLRSEHGTWIIDNEGKQYRVPPNYPARIRPSD 635

Query: 66  MIEFG 70
           +I+FG
Sbjct: 636 VIQFG 640


  Database: Glyma1.pep.fa
    Posted date:  Apr 17, 2009 10:05 AM
  Number of letters in database: 25,431,846
  Number of sequences in database:  75,778
  
Lambda     K      H
   0.345    0.157    0.542 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,434,379
Number of Sequences: 75778
Number of extensions: 113287
Number of successful extensions: 326
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 322
Number of HSP's gapped (non-prelim): 2
length of query: 70
length of database: 25,431,846
effective HSP length: 42
effective length of query: 28
effective length of database: 22,249,170
effective search space: 622976760
effective search space used: 622976760
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 107 (45.8 bits)